Pcons.net Protein Structure Prediction

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Saturday, April 20 2024

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Submission

23496 : SP|P10145|IL8_HUMAN INTERLEUKIN-8 OS=HOMO SAPIENS OX=9606 GN=CXCL8 PE=1 SV=1

Your submitted sequence: sequence (99 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

rpsblast

Rank	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	9e-23	0.397	0.405	0.438	2R3Z_D	N/A
2	6e-22	0.255	0.252	0.238	1ROD_B	2.40.50.40.11.1
3	1e-21	0.379	0.383	0.401	1O7Z_B	2.40.50.40.15.1
4	1e-21	0.230	0.213	0.146	1RJT_A	2.40.50.40.20.1
5	2e-21	0.446	0.467	0.550	3IL8_A	N/A
6	2e-21	0.428	0.438	0.479	3N52_C	N/A
7	3e-21	0.303	0.317	0.375	2HDL_A	N/A
8	1e-20	0.417	0.419	0.426	1QNK_A	2.40.50.40.8.3
9	4e-20	0.363	0.361	0.351	1MSH_A	2.40.50.40.8.3

References

Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]