Pcons.net Protein Structure Prediction Meta Server Wednesday, November 25 2020
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© Arne Elofsson

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23496 : SP|P10145|IL8_HUMAN INTERLEUKIN-8 OS=HOMO SAPIENS OX=9606 GN=CXCL8 PE=1 SV=1

Your submitted sequence: sequence (99 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.5
2e-210.4460.4670.550 3IL8_AN/A
2
ffas.3
-0.418E+020.4510.4660.528 1QE6_A2.40.50.40.11.1
3
ffas.1
-0.423E+020.4510.4600.498 1ICW_A2.40.50.40.11.1
4
pgenthreader.1
73.3810.4310.4550.550 3IL8_AN/A
5
ffas.14
-0.387E+020.4490.4460.433 1TVX_A2.40.50.40.8.1
6
ffas.10
-0.396E+020.4360.4420.467 1MGS_A2.40.50.40.8.3
7
rpsblast.6
2e-210.4280.4380.479 3N52_CN/A
8
pgenthreader.4
58.6530.4250.4350.473 1TVX_A2.40.50.40.8.1
9
pgenthreader.3
61.0700.4180.4300.479 1MGS_A2.40.50.40.8.3
10
pgenthreader.7
54.7500.4130.4220.460 3N52_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center