Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

Main Menu

Submission

23496 : SP|P10145|IL8_HUMAN INTERLEUKIN-8 OS=HOMO SAPIENS OX=9606 GN=CXCL8 PE=1 SV=1

Your submitted sequence: sequence (99 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.5	2e-21	0.446	0.467	0.550	3IL8_A	N/A
2	ffas.3	-0.418E+02	0.451	0.466	0.528	1QE6_A	2.40.50.40.11.1
3	ffas.1	-0.423E+02	0.451	0.460	0.498	1ICW_A	2.40.50.40.11.1
4	pgenthreader.1	73.381	0.431	0.455	0.550	3IL8_A	N/A
5	ffas.14	-0.387E+02	0.449	0.446	0.433	1TVX_A	2.40.50.40.8.1
6	ffas.10	-0.396E+02	0.436	0.442	0.467	1MGS_A	2.40.50.40.8.3
7	rpsblast.6	2e-21	0.428	0.438	0.479	3N52_C	N/A
8	pgenthreader.4	58.653	0.425	0.435	0.473	1TVX_A	2.40.50.40.8.1
9	pgenthreader.3	61.070	0.418	0.430	0.479	1MGS_A	2.40.50.40.8.3
10	pgenthreader.7	54.750	0.413	0.422	0.460	3N52_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.