Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23494 :

Your submitted sequence: sequence (354 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 33 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.107E+03	0.240	0.311	0.597	1FG5_N	3.90.550.10.1.2
2	ffas.10	-0.114E+02	0.099	0.130	0.252	1G9R_A	3.90.550.10.11.1
3	pgenthreader.2	181.067	0.372	0.430	0.661	1O7Q_A	3.90.550.10.1.2
4	rpsblast.2	1e-140	0.413	0.464	0.668	1O7Q_B	3.90.550.10.1.2
5	ffas.11	-0.114E+02	0.100	0.135	0.273	1SS9_A	3.90.550.10.11.1
6	pgenthreader.6	55.226	0.111	0.140	0.256	1V84_A	3.90.550.10.12.1
7	ffas.2	-0.115E+03	0.233	0.297	0.553	1WSZ_A	3.90.550.10.1.1
8	pgenthreader.5	58.326	0.122	0.153	0.276	2D0J_A	3.90.550.10.12.1
9	pgenthreader.9	38.462	0.096	0.135	0.291	2GAK_A	N/A
10	ffas.1	-0.115E+03	0.230	0.294	0.552	2O1F_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.