Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23492 :

Your submitted sequence: sequence (241 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.4	-0.577E+02	0.431	0.426	0.408	1C3P_A	3.40.800.20.1.1
2	pgenthreader.8	68.651	0.411	0.396	0.334	1C3P_A	3.40.800.20.1.1
3	rpsblast.4	1e-37	0.418	0.415	0.401	1C3P_A	3.40.800.20.1.1
4	pgenthreader.7	72.229	0.422	0.417	0.396	1ZZ1_A	N/A
5	rpsblast.8	3e-25	0.426	0.409	0.342	1ZZ1_D	N/A
6	ffas.7	-0.457E+02	0.430	0.419	0.377	2VCG_A	N/A
7	ffas.10	-0.778E+01	0.107	0.145	0.296	2VPT_A	N/A
8	ffas.5	-0.521E+02	0.441	0.421	0.342	2VQJ_A	N/A
9	pgenthreader.4	77.566	0.430	0.417	0.367	2VQM_A	N/A
10	rpsblast.7	2e-32	0.372	0.371	0.365	2VQM_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.