Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

Main Menu

Submission

23491 : Brandon Zimmerman

Your submitted sequence: sequence (371 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.536E+01	0.019	0.034	0.093	1AGN_A	3.90.180.10.1.1 3.40.50.720.27.1
2	ffas.10	-0.533E+01	0.020	0.037	0.106	1EE2_A	3.90.180.10.1.1 3.40.50.720.27.1
3	ffas.8	-0.548E+01	0.027	0.053	0.159	1O5H_A	N/A
4	ffas.7	-0.564E+01	0.006	0.005	0.003	1Q08_A	1.10.1660.10.1.1
5	pgenthreader.9	30.626	0.035	0.061	0.165	1U5P_A	1.20.58.60.2.1 1.20.58.60.3.1
6	pgenthreader.5	31.829	0.032	0.070	0.221	1WA5_C	N/A
7	ffas.6	-0.573E+01	0.028	0.036	0.069	1WOJ_A	N/A
8	pgenthreader.7	31.138	0.033	0.059	0.164	2H7O_A	N/A
9	ffas.3	-0.589E+01	0.027	0.022	0.004	2ILX_A	N/A
10	ffas.2	-0.664E+01	0.019	0.011	-0.019	2LOS_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.