Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 18 2024

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Submission

23490 : id:23489:145-558

Your submitted sequence: sequence (414 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.956E+01	0.034	0.067	0.198	1IM8_A	3.40.50.150.22.1
2	pgenthreader.9	45.051	0.033	0.092	0.328	1J8M_F	1.20.120.140.2.1 3.40.50.300.2.2
3	ffas.7	-0.750E+01	0.034	0.072	0.223	1JQD_A	3.40.50.150.43.1
4	rpsblast.5	0.015	0.011	-0.021	-0.151	1QZV_U	N/A
5	rpsblast.6	0.017	0.012	0.009	-0.005	1QZV_U	N/A
6	ffas.2	-0.855E+01	0.036	0.073	0.219	1RI1_A	3.40.50.150.36.1
7	rpsblast.1	9e-13	0.026	0.014	-0.032	2PFF_B	N/A
8	rpsblast.10	1.4	0.002	0.001	-0.005	2PFF_B	N/A
9	rpsblast.2	1e-08	0.022	0.019	0.005	2PFF_B	N/A
10	rpsblast.3	2e-04	0.021	0.015	-0.010	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.