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© Arne Elofsson

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23490 : id:23489:145-558

Your submitted sequence: sequence (414 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.4
46.7860.0410.0950.309 4C9B_AN/A
2
pgenthreader.3
48.7450.0320.0950.345 4C7O_AN/A
3
pgenthreader.9
45.0510.0330.0920.328 1J8M_F1.20.120.140.2.1 3.40.50.300.2.2
4
pgenthreader.7
45.4090.0320.0900.324 3E70_CN/A
5
pgenthreader.1
52.0660.0400.0870.276 3FHT_AN/A
6
pgenthreader.5
46.4200.0330.0820.277 2YHS_AN/A
7
ffas.9
-0.690E+010.0380.0730.212 3BGV_AN/A
8
ffas.2
-0.855E+010.0360.0730.219 1RI1_A3.40.50.150.36.1
9
ffas.10
-0.682E+010.0330.0720.230 3BKX_AN/A
10
ffas.7
-0.750E+010.0340.0720.223 1JQD_A3.40.50.150.43.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center