Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 18 2024

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Submission

23471 : equus iAPP

Your submitted sequence: sequence (37 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.10	20.639	0.134	0.166	0.296	1BKU_A	N/A
2	rpsblast.9	28	0.098	0.037	-0.209	1IOO_A	3.90.730.10.3.1
3	rpsblast.8	13	0.114	0.122	0.154	1JU2_A	N/A
4	pgenthreader.6	21.783	0.115	0.127	0.175	1QDM_A	N/A
5	ffas.9	-0.484E+01	0.073	0.010	-0.243	1WFH_A	N/A
6	ffas.10	-0.477E+01	0.073	-0.007	-0.327	1WFP_A	N/A
7	ffas.8	-0.494E+01	0.072	-0.022	-0.398	1WG2_A	N/A
8	pgenthreader.3	22.655	0.076	0.061	0.000	1WHY_A	N/A
9	ffas.5	-0.571E+01	0.071	-0.007	-0.320	1X4W_A	N/A
10	rpsblast.6	6.0	0.132	0.107	0.006	2CFQ_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.