Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23468 : ANH21152

Your submitted sequence: sequence (686 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.13	-0.117E+03	0.344	0.384	0.544	1AKN_A	N/A
2	ffas.19	-0.105E+03	0.354	0.387	0.520	1C7I_A	3.40.50.1820.42.1
3	rpsblast.5	4e-62	0.260	0.275	0.334	1CRL_A	N/A
4	ffas.5	-0.125E+03	0.396	0.437	0.602	1DX4_A	3.40.50.1820.57.4
5	pgenthreader.5	233.213	0.430	0.467	0.615	1DX4_A	3.40.50.1820.57.4
6	pgenthreader.3	248.287	0.443	0.484	0.647	1EA5_A	3.40.50.1820.57.1
7	ffas.16	-0.114E+03	0.344	0.389	0.568	1F6W_A	3.40.50.1820.55.1
8	ffas.3	-0.126E+03	0.414	0.459	0.640	1F8U_A	3.40.50.1820.57.3
9	rpsblast.3	2e-68	0.224	0.247	0.338	1GZ7_A	3.40.50.1820.51.1
10	ffas.17	-0.112E+03	0.343	0.378	0.520	1JMY_A	3.40.50.1820.55.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.