Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 18 2024

Main Menu

Submission

23465 :

Your submitted sequence: sequence (100 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.7	53.866	0.591	0.609	0.680	1UPQ_A	2.30.29.30.4.1
2	ffas.8	-0.516E+02	0.583	0.600	0.668	1ZM0_A	2.30.29.30.22.1
3	ffas.16	-0.480E+02	0.567	0.588	0.674	1V89_A	2.30.29.30.32.1
4	ffas.11	-0.506E+02	0.569	0.586	0.654	1X05_A	2.30.29.30.22.1
5	rpsblast.4	3e-05	0.608	0.586	0.496	1EAZ_A	2.30.29.30.5.1
6	pgenthreader.10	53.470	0.566	0.584	0.656	1X05_A	2.30.29.30.22.1
7	pgenthreader.5	55.457	0.566	0.580	0.634	2I5F_A	N/A
8	ffas.1	-0.556E+02	0.560	0.578	0.652	2D9X_A	N/A
9	ffas.6	-0.524E+02	0.548	0.578	0.696	1XX0_A	2.30.29.30.22.1
10	ffas.7	-0.518E+02	0.577	0.576	0.571	1EAZ_A	2.30.29.30.5.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.