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© Arne Elofsson

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23465 :

Your submitted sequence: sequence (100 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.7
53.8660.5910.6090.680 1UPQ_A2.30.29.30.4.1
2
ffas.8
-0.516E+020.5830.6000.668 1ZM0_A2.30.29.30.22.1
3
ffas.16
-0.480E+020.5670.5880.674 1V89_A2.30.29.30.32.1
4
ffas.11
-0.506E+020.5690.5860.654 1X05_A2.30.29.30.22.1
5
rpsblast.4
3e-050.6080.5860.496 1EAZ_A2.30.29.30.5.1
6
pgenthreader.10
53.4700.5660.5840.656 1X05_A2.30.29.30.22.1
7
pgenthreader.5
55.4570.5660.5800.634 2I5F_AN/A
8
ffas.1
-0.556E+020.5600.5780.652 2D9X_AN/A
9
ffas.6
-0.524E+020.5480.5780.696 1XX0_A2.30.29.30.22.1
10
ffas.7
-0.518E+020.5770.5760.571 1EAZ_A2.30.29.30.5.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center