Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23461 : IRAK1

Your submitted sequence: sequence (693 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.526E+02	0.212	0.211	0.208	2EVA_A	N/A
2	pgenthreader.8	103.794	0.200	0.200	0.201	2EVA_A	N/A
3	ffas.3	-0.888E+02	0.231	0.237	0.259	2NRU_A	N/A
4	rpsblast.8	3e-91	0.215	0.220	0.240	2NRU_B	N/A
5	pgenthreader.2	147.164	0.225	0.233	0.266	2OIB_A	N/A
6	pgenthreader.1	159.782	0.229	0.230	0.232	2QKW_B	N/A
7	rpsblast.4	3e-94	0.206	0.204	0.194	2QKW_B	N/A
8	ffas.6	-0.616E+02	0.206	0.205	0.200	2QLU_A	N/A
9	pgenthreader.10	102.181	0.217	0.217	0.219	2QLU_A	N/A
10	ffas.14	-0.503E+02	0.174	0.181	0.209	2Y4I_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.