Pcons.net Protein Structure Prediction Meta Server Thursday, August 6 2020
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© Arne Elofsson

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23460 : TRAIL

Your submitted sequence: sequence (336 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.8
96.8900.3140.2870.180 1DG6_A2.60.120.40.1.1
2
pgenthreader.3
96.8900.3140.2870.180 1DG6_A2.60.120.40.1.1
3
pgenthreader.4
96.8900.3140.2870.180 1DG6_A2.60.120.40.1.1
4
pgenthreader.7
96.8900.3140.2870.180 1DG6_A2.60.120.40.1.1
5
ffas.2
-0.570E+020.3020.2850.217 3ME2_AN/A
6
ffas.1
-0.570E+020.2430.2720.387 1DG6_A2.60.120.40.1.1
7
ffas.14
-0.466E+020.2790.2690.229 2ZJC_AN/A
8
rpsblast.10
3e-380.2910.2670.171 1TNR_A2.60.120.40.9.1
9
rpsblast.9
3e-380.2910.2670.171 1TNR_A2.60.120.40.9.1
10
ffas.10
-0.479E+020.2860.2650.179 3IT8_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center