Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23460 : TRAIL

Your submitted sequence: sequence (336 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	96.890	0.314	0.287	0.180	1DG6_A	2.60.120.40.1.1
2	pgenthreader.4	96.890	0.314	0.287	0.180	1DG6_A	2.60.120.40.1.1
3	pgenthreader.7	96.890	0.314	0.287	0.180	1DG6_A	2.60.120.40.1.1
4	pgenthreader.8	96.890	0.314	0.287	0.180	1DG6_A	2.60.120.40.1.1
5	ffas.2	-0.570E+02	0.302	0.285	0.217	3ME2_A	N/A
6	ffas.1	-0.570E+02	0.243	0.272	0.387	1DG6_A	2.60.120.40.1.1
7	ffas.14	-0.466E+02	0.279	0.269	0.229	2ZJC_A	N/A
8	rpsblast.9	3e-38	0.291	0.267	0.171	1TNR_A	2.60.120.40.9.1
9	rpsblast.10	3e-38	0.291	0.267	0.171	1TNR_A	2.60.120.40.9.1
10	ffas.10	-0.479E+02	0.286	0.265	0.179	3IT8_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.