Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23458 : Sod_Pcons

Your submitted sequence: sequence (154 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.5	-0.937E+02	0.773	0.784	0.826	1BA9_A	N/A
2	ffas.10	-0.936E+02	0.723	0.750	0.857	1DSW_A	2.60.40.200.1.1
3	ffas.18	-0.915E+02	0.906	0.908	0.917	1E9O_A	2.60.40.200.1.1
4	ffas.17	-0.915E+02	0.909	0.900	0.863	1E9O_B	2.60.40.200.1.1
5	ffas.8	-0.937E+02	0.923	0.924	0.930	1HL4_A	2.60.40.200.1.1
6	ffas.1	-0.951E+02	0.921	0.918	0.908	1N18_A	2.60.40.200.1.1
7	pgenthreader.4	106.949	0.886	0.889	0.901	1Q0E_A	2.60.40.200.1.1
8	rpsblast.9	5e-49	0.861	0.864	0.877	1SRD_A	2.60.40.200.1.3
9	ffas.14	-0.931E+02	0.915	0.915	0.913	1TO4_A	2.60.40.200.1.3
10	pgenthreader.3	107.106	0.886	0.890	0.905	1TO4_A	2.60.40.200.1.3

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.