Pcons.net Protein Structure Prediction Meta Server Thursday, March 28 2024
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© Arne Elofsson

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23454 : RdRp

Your submitted sequence: sequence (519 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.6
89.4900.3310.3390.370 4NLR_AN/A
2
ffas.16
-0.729E+020.3350.3360.341 2IJD_1N/A
3
ffas.8
-0.781E+020.3220.3290.358 1XR6_A3.30.70.270.6.1 1.20.960.20.1.2
4
ffas.4
-0.797E+020.3150.3280.382 1TP7_AN/A
5
ffas.10
-0.778E+020.3230.3250.334 3CDU_AN/A
6
ffas.6
-0.795E+020.3130.3240.368 1XR5_AN/A
7
pgenthreader.7
88.4690.3170.3230.349 3CDU_AN/A
8
pgenthreader.3
97.0060.3120.3220.360 1XR6_A3.30.70.270.6.1 1.20.960.20.1.2
9
ffas.1
-0.828E+020.3230.3210.313 3OL6_AN/A
10
pgenthreader.8
86.6000.3040.3200.384 3BSO_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center