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23452 :

Your submitted sequence: sequence (132 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.11
-0.699E+020.8100.8030.775 1AB0_AN/A
2
pgenthreader.5
95.4410.7960.8090.863 1AB0_AN/A
3
ffas.20
-0.691E+020.8050.8190.875 1B56_AN/A
4
ffas.5
-0.705E+020.7140.7170.728 1BWY_A2.40.128.20.16.1
5
rpsblast.6
6e-380.7130.7160.728 1BWY_A2.40.128.20.16.1
6
ffas.10
-0.699E+020.8090.8060.795 1FDQ_A2.40.128.20.16.1
7
pgenthreader.10
92.5290.7950.8030.836 1FDQ_A2.40.128.20.16.1
8
ffas.4
-0.706E+020.7700.7760.802 1G5W_A2.40.128.20.16.1
9
ffas.9
-0.700E+020.8180.8220.839 1G74_A2.40.128.20.16.2
10
rpsblast.4
4e-390.8340.8350.838 1G7N_A2.40.128.20.16.2
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center