Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23450 : id:23449:1-45,95-385

Your submitted sequence: sequence (336 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.5	-0.868E+02	0.098	0.202	0.616	1GZM_A	1.20.1070.10.6.1
2	rpsblast.1	3e-06	0.039	0.036	0.025	1HOF_A	N/A
3	pgenthreader.9	61.489	0.087	0.163	0.466	1U19_A	1.20.1070.10.6.1
4	ffas.2	-0.964E+02	0.103	0.204	0.607	2KS9_A	N/A
5	pgenthreader.2	71.534	0.086	0.163	0.471	2KS9_A	N/A
6	ffas.1	-0.101E+03	0.053	0.151	0.544	2LNL	N/A
7	pgenthreader.7	64.918	0.053	0.115	0.364	2LNL_A	N/A
8	rpsblast.2	1e-05	0.031	0.071	0.232	2PFF_B	N/A
9	rpsblast.3	4e-04	0.028	0.080	0.290	2PFF_B	N/A
10	rpsblast.4	0.008	0.028	0.082	0.297	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.