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© Arne Elofsson

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23448 : Pcons

Your submitted sequence: sequence (129 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.2
58.2070.3980.4000.409 1FGY_A2.30.29.30.2.1
2
rpsblast.5
2e-070.3700.3670.355 1FGY_A2.30.29.30.2.1
3
ffas.2
-0.530E+020.4330.4310.423 1U27_A2.30.29.30.2.1
4
pgenthreader.4
56.7070.4140.4130.411 1U29_A2.30.29.30.2.1
5
ffas.1
-0.539E+020.4330.4380.460 1U2B_A2.30.29.30.2.1
6
ffas.12
-0.505E+020.4220.4290.459 1U5D_AN/A
7
ffas.6
-0.515E+020.4130.4180.439 1U5F_AN/A
8
ffas.7
-0.512E+020.4230.4380.497 1U5G_AN/A
9
rpsblast.8
4e-070.3630.3540.317 1U5G_AN/A
10
ffas.18
-0.488E+020.4220.4410.515 1UPQ_A2.30.29.30.4.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center