Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23442 :

Your submitted sequence: sequence (395 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 34 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.3	-0.917E+02	0.204	0.273	0.549	1FGX_A	3.90.550.10.2.1
2	pgenthreader.10	35.033	0.040	0.087	0.276	1JDP_A	3.40.50.2300.37.1 3.40.50.9600.2.2
3	ffas.1	-0.925E+02	0.206	0.279	0.573	1NF5_B	3.90.550.10.2.1
4	rpsblast.10	0.064	0.000	-0.009	-0.047	1QZV_U	N/A
5	ffas.9	-0.124E+02	0.069	0.106	0.256	1XHB_A	N/A
6	pgenthreader.1	17.632	0.266	0.324	0.554	1YRO_B	3.90.550.10.2.1
7	pgenthreader.2	17.632	0.001	0.002	0.007	1YRO_B	3.90.550.10.2.1
8	rpsblast.2	3e-92	0.265	0.325	0.565	1YRO_D	3.90.550.10.2.1
9	ffas.4	-0.899E+02	0.207	0.276	0.550	2AE7_A	3.90.550.10.2.1
10	ffas.14	-0.957E+01	0.069	0.084	0.143	2BO4_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.