Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23441 :

Your submitted sequence: sequence (119 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.573E+02	0.479	0.487	0.521	1EAZ_A	2.30.29.30.5.1
2	pgenthreader.6	37.199	0.413	0.423	0.464	1EAZ_A	2.30.29.30.5.1
3	rpsblast.2	6e-14	0.517	0.509	0.476	1EAZ_A	2.30.29.30.5.1
4	ffas.4	-0.552E+02	0.471	0.474	0.485	1FAO_A	2.30.29.30.13.1
5	ffas.7	-0.538E+02	0.423	0.423	0.425	1PLS_A	N/A
6	pgenthreader.10	36.402	0.353	0.359	0.381	1U29_A	2.30.29.30.2.1
7	ffas.6	-0.544E+02	0.465	0.462	0.448	1U5D_A	N/A
8	ffas.11	-0.524E+02	0.475	0.480	0.499	1U5F_A	N/A
9	rpsblast.7	1e-11	0.512	0.507	0.487	1U5F_A	N/A
10	ffas.9	-0.537E+02	0.482	0.476	0.452	1U5G_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.