Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23439 : mmp9

Your submitted sequence: sequence (707 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

rpsblast

Rank	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	4e-77	0.169	0.215	0.400	1L6J_A	1.10.101.10.1.2 3.40.390.10.2.7 2.10.10.10.3.1 2.10.10.10.3.1 2.10.10.10.2.1
2	3e-45	0.080	0.115	0.257	1ITV_A	2.110.10.10.1.1
3	3e-42	0.009	0.020	0.063	1H8P_A	2.10.10.10.1.2 2.10.10.10.1.1
4	2e-35	0.012	0.021	0.059	1H8P_A	2.10.10.10.1.2 2.10.10.10.1.1
5	4e-32	0.106	0.108	0.116	1HY7_A	3.40.390.10.2.3
6	1e-31	0.085	0.087	0.097	3MA2_A	N/A
7	3e-29	0.092	0.086	0.064	1HV5_C	3.40.390.10.2.8
8	3e-29	0.077	0.106	0.224	3C7X_A	N/A
9	4e-28	0.104	0.105	0.107	3AYU_A	N/A
10	5e-28	0.011	0.016	0.038	1J7M_A	2.10.10.10.4.1

References

Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]