Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

Main Menu

Submission

23439 : mmp9

Your submitted sequence: sequence (707 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.151E+03	0.216	0.299	0.629	1CK7_A	3.40.390.10.10.2 2.10.10.10.3.2 2.10.10.10.2.2 2.10.10.10.2.1 2.110.10.10.3.1
2	pgenthreader.1	237.689	0.172	0.260	0.614	1CK7_A	3.40.390.10.10.2 2.10.10.10.3.2 2.10.10.10.2.2 2.10.10.10.2.1 2.110.10.10.3.1
3	pgenthreader.3	159.005	0.124	0.174	0.375	1EAK_A	1.10.101.10.1.1 3.40.390.10.2.4 2.10.10.10.3.2 2.10.10.10.3.3 2.10.10.10.2.1
4	ffas.15	-0.542E+02	0.051	0.055	0.069	1EUB_A	3.40.390.10.2.4
5	ffas.5	-0.982E+02	0.134	0.177	0.347	1FBL_A	N/A
6	pgenthreader.6	144.911	0.141	0.192	0.397	1FBL_A	N/A
7	ffas.13	-0.543E+02	0.082	0.088	0.113	1GKC_A	3.40.390.10.2.7
8	rpsblast.3	3e-42	0.009	0.020	0.063	1H8P_A	2.10.10.10.1.2 2.10.10.10.1.1
9	rpsblast.4	2e-35	0.012	0.021	0.059	1H8P_A	2.10.10.10.1.2 2.10.10.10.1.1
10	ffas.17	-0.539E+02	0.064	0.069	0.091	1HOV_A	3.40.390.10.2.4

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.