Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23438 :

Your submitted sequence: sequence (346 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.6	25.242	0.066	0.113	0.303	1D1D_A	1.10.375.10.2.1 1.10.1200.30.3.1
2	ffas.3	-0.593E+01	0.047	0.057	0.096	1HA8_A	1.10.10.190.2.1
3	ffas.8	-0.545E+01	0.073	0.089	0.153	1HJR_A	3.30.420.10.10.1
4	ffas.2	-0.601E+01	0.053	0.056	0.069	1HKG_A	N/A
5	pgenthreader.8	24.778	0.031	0.037	0.059	1M3W_A	N/A
6	ffas.1	-0.652E+01	0.032	0.017	-0.045	1P85_B	N/A
7	pgenthreader.1	26.794	0.040	0.047	0.075	1WQC_A	N/A
8	ffas.9	-0.525E+01	0.074	0.109	0.248	1YCO_A	N/A
9	pgenthreader.10	24.404	0.067	0.106	0.261	2FKN_A	N/A
10	rpsblast.8	4e-32	0.026	0.021	0.003	2GZS_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.