Pcons.net Protein Structure Prediction

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Saturday, April 20 2024

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Submission

23433 : PNW85077.1:505-629 HYPOTHETICAL PROTEIN CHLRE_03G170650V5 [CHLAMYDOMONAS REINHARDTII]

Your submitted sequence: sequence (125 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.11	-0.193E+02	0.447	0.462	0.524	1EAZ_A	2.30.29.30.5.1
2	ffas.15	-0.185E+02	0.425	0.445	0.527	1FAO_A	2.30.29.30.13.1
3	pgenthreader.1	39.856	0.358	0.381	0.473	1FGY_A	2.30.29.30.2.1
4	ffas.5	-0.208E+02	0.409	0.401	0.368	1H10_A	2.30.29.30.1.1
5	ffas.4	-0.210E+02	0.333	0.332	0.329	1P6S_A	2.30.29.30.1.1
6	rpsblast.3	3e-08	0.320	0.325	0.347	1P6S_A	2.30.29.30.1.1
7	ffas.10	-0.197E+02	0.411	0.426	0.487	1PLS_A	N/A
8	pgenthreader.3	38.296	0.354	0.383	0.498	1PLS_A	N/A
9	pgenthreader.8	36.420	0.360	0.391	0.514	1U29_A	2.30.29.30.2.1
10	rpsblast.1	2e-09	0.405	0.399	0.376	1UNQ_A	2.30.29.30.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.