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© Arne Elofsson

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23433 : PNW85077.1:505-629 HYPOTHETICAL PROTEIN CHLRE_03G170650V5 [CHLAMYDOMONAS REINHARDTII]

Your submitted sequence: sequence (125 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.10
36.1850.4700.4860.552 2I5F_AN/A
2
ffas.11
-0.193E+020.4470.4620.524 1EAZ_A2.30.29.30.5.1
3
rpsblast.8
2e-070.4470.4610.518 2D9Y_A2.30.29.30.4.2
4
pgenthreader.6
37.5210.4440.4570.510 4A6H_AN/A
5
ffas.15
-0.185E+020.4250.4450.527 1FAO_A2.30.29.30.13.1
6
ffas.12
-0.190E+020.4130.4310.502 2X18_AN/A
7
ffas.10
-0.197E+020.4110.4260.487 1PLS_AN/A
8
rpsblast.9
2e-070.4480.4250.334 3AJ4_AN/A
9
rpsblast.7
1e-070.4170.4210.439 1V89_A2.30.29.30.32.1
10
ffas.16
-0.182E+020.4060.4200.476 2W2W_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center