Pcons.net Protein Structure Prediction

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Thursday, April 25 2024

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Submission

23429 : PH Domain Model

Your submitted sequence: sequence (129 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.584E+02	0.496	0.494	0.484	1EAZ_A	2.30.29.30.5.1
2	ffas.10	-0.563E+02	0.494	0.493	0.488	1FAO_A	2.30.29.30.13.1
3	pgenthreader.2	72.422	0.500	0.504	0.522	1FGY_A	2.30.29.30.2.1
4	rpsblast.9	3e-11	0.438	0.426	0.376	1FGY_A	2.30.29.30.2.1
5	ffas.4	-0.571E+02	0.419	0.417	0.411	1H10_A	2.30.29.30.1.1
6	ffas.6	-0.566E+02	0.358	0.372	0.428	1P6S_A	2.30.29.30.1.1
7	rpsblast.7	2e-11	0.344	0.363	0.437	1P6S_A	2.30.29.30.1.1
8	ffas.14	-0.551E+02	0.446	0.454	0.484	1PLS_A	N/A
9	ffas.9	-0.563E+02	0.505	0.507	0.517	1U27_A	2.30.29.30.2.1
10	pgenthreader.3	69.032	0.505	0.511	0.534	1U29_A	2.30.29.30.2.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.