Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23426 : RT lipase pcons

Your submitted sequence: sequence (377 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 38 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.496E+02	0.196	0.256	0.497	1CVL_A	N/A
2	pgenthreader.5	83.818	0.217	0.246	0.361	1CVL_A	N/A
3	ffas.6	-0.617E+02	0.195	0.245	0.444	1EX9_A	3.40.50.1820.1.2
4	pgenthreader.1	87.385	0.221	0.241	0.323	1EX9_A	3.40.50.1820.1.2
5	ffas.8	-0.503E+02	0.202	0.257	0.476	1HQD_A	3.40.50.1820.1.1
6	ffas.13	-0.363E+02	0.094	0.085	0.050	1I6W_A	3.40.50.1820.45.1
7	pgenthreader.8	44.142	0.134	0.112	0.026	1ISP_A	3.40.50.1820.45.1
8	ffas.1	-0.663E+02	0.196	0.226	0.345	1JI3_A	3.40.50.1820.23.1
9	ffas.2	-0.653E+02	0.190	0.220	0.340	1KU0_A	3.40.50.1820.23.1
10	ffas.11	-0.364E+02	0.117	0.160	0.332	1LBS_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.