Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23423 : Ph domain of my protein

Your submitted sequence: sequence (116 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.6	56.001	0.515	0.531	0.593	2DN6_A	N/A
2	ffas.20	-0.503E+02	0.521	0.527	0.551	1U2B_A	2.30.29.30.2.1
3	ffas.11	-0.532E+02	0.513	0.526	0.579	2DN6_A	N/A
4	ffas.4	-0.564E+02	0.526	0.526	0.524	1FAO_A	2.30.29.30.13.1
5	pgenthreader.2	59.148	0.499	0.523	0.620	4KAX_B	N/A
6	ffas.8	-0.544E+02	0.517	0.523	0.547	1ZM0_A	2.30.29.30.22.1
7	rpsblast.1	2e-10	0.512	0.519	0.547	2DN6_A	N/A
8	ffas.19	-0.507E+02	0.513	0.518	0.539	1V89_A	2.30.29.30.32.1
9	pgenthreader.7	55.359	0.514	0.517	0.531	1U29_A	2.30.29.30.2.1
10	pgenthreader.8	54.831	0.512	0.517	0.539	1FAO_A	2.30.29.30.13.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.