Pcons.net Protein Structure Prediction Meta Server Thursday, May 19 2022
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© Arne Elofsson

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23423 : Ph domain of my protein

Your submitted sequence: sequence (116 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.6
56.0010.5150.5310.593 2DN6_AN/A
2
ffas.20
-0.503E+020.5210.5270.551 1U2B_A2.30.29.30.2.1
3
ffas.11
-0.532E+020.5130.5260.579 2DN6_AN/A
4
ffas.4
-0.564E+020.5260.5260.524 1FAO_A2.30.29.30.13.1
5
pgenthreader.2
59.1480.4990.5230.620 4KAX_BN/A
6
ffas.8
-0.544E+020.5170.5230.547 1ZM0_A2.30.29.30.22.1
7
rpsblast.1
2e-100.5120.5190.547 2DN6_AN/A
8
ffas.19
-0.507E+020.5130.5180.539 1V89_A2.30.29.30.32.1
9
pgenthreader.7
55.3590.5140.5170.531 1U29_A2.30.29.30.2.1
10
pgenthreader.8
54.8310.5120.5170.539 1FAO_A2.30.29.30.13.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center