Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23422 : Zachery Kerr

Your submitted sequence: sequence (121 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.6	-0.597E+02	0.532	0.551	0.625	1EAZ_A	2.30.29.30.5.1
2	ffas.3	-0.607E+02	0.530	0.544	0.598	1FAO_A	2.30.29.30.13.1
3	pgenthreader.2	66.437	0.533	0.545	0.595	1FGY_A	2.30.29.30.2.1
4	ffas.1	-0.647E+02	0.499	0.521	0.608	1PLS_A	N/A
5	pgenthreader.3	64.873	0.532	0.544	0.590	1U29_A	2.30.29.30.2.1
6	ffas.14	-0.569E+02	0.532	0.536	0.552	1U5D_A	N/A
7	pgenthreader.8	61.753	0.522	0.526	0.540	1UPQ_A	2.30.29.30.4.1
8	rpsblast.8	2e-13	0.493	0.504	0.550	1UPQ_A	2.30.29.30.4.1
9	ffas.4	-0.603E+02	0.532	0.550	0.622	1V89_A	2.30.29.30.32.1
10	ffas.7	-0.594E+02	0.466	0.478	0.525	1WGQ_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.