Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23422 : Zachery Kerr

Your submitted sequence: sequence (121 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.585E+02	0.548	0.567	0.641	2D9Y_A	2.30.29.30.4.2
2	ffas.13	-0.575E+02	0.548	0.562	0.618	1ZM0_A	2.30.29.30.22.1
3	pgenthreader.6	62.851	0.540	0.561	0.646	2DN6_A	N/A
4	rpsblast.9	2e-13	0.550	0.552	0.559	2D9Y_A	2.30.29.30.4.2
5	pgenthreader.4	64.742	0.535	0.551	0.616	2D9Y_A	2.30.29.30.4.2
6	ffas.6	-0.597E+02	0.532	0.551	0.625	1EAZ_A	2.30.29.30.5.1
7	ffas.4	-0.603E+02	0.532	0.550	0.622	1V89_A	2.30.29.30.32.1
8	ffas.2	-0.615E+02	0.536	0.548	0.596	2DN6_A	N/A
9	pgenthreader.2	66.437	0.533	0.545	0.595	1FGY_A	2.30.29.30.2.1
10	rpsblast.2	3e-15	0.541	0.545	0.562	2DN6_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.