Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23418 :

Your submitted sequence: sequence (141 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.3	-0.620E+02	0.416	0.430	0.488	1EAZ_A	2.30.29.30.5.1
2	pgenthreader.6	65.061	0.437	0.455	0.526	1EAZ_A	2.30.29.30.5.1
3	ffas.2	-0.627E+02	0.422	0.431	0.468	1FAO_A	2.30.29.30.13.1
4	rpsblast.7	6e-21	0.398	0.387	0.344	1FAO_A	2.30.29.30.13.1
5	pgenthreader.1	16.000	0.433	0.443	0.484	1FGY_A	2.30.29.30.2.1
6	pgenthreader.2	16.000	0.004	0.009	0.027	1FGY_A	2.30.29.30.2.1
7	ffas.5	-0.592E+02	0.381	0.400	0.475	1PLS_A	N/A
8	pgenthreader.9	63.709	0.442	0.454	0.501	1U29_A	2.30.29.30.2.1
9	rpsblast.9	1e-20	0.331	0.333	0.341	1UPQ_A	2.30.29.30.4.1
10	ffas.9	-0.568E+02	0.360	0.389	0.503	1V5U_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.