Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23414 : 1 baltymas

Your submitted sequence: sequence (638 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.7	-0.373E+02	0.126	0.155	0.272	1AQI_A	3.40.50.150.19.1 3.90.220.10.1.1
2	ffas.8	-0.199E+02	0.084	0.089	0.107	1DUS_A	3.40.50.150.21.1
3	ffas.9	-0.183E+02	0.067	0.082	0.142	1O9G_A	3.40.50.150.5.1 1.10.287.540.1.1
4	ffas.10	-0.183E+02	0.074	0.084	0.123	1O9H_A	3.40.50.150.5.1 1.10.287.540.1.1
5	pgenthreader.9	51.494	0.026	0.066	0.226	1YF2_A	N/A
6	ffas.1	-0.916E+02	0.189	0.225	0.371	2AR0_A	N/A
7	pgenthreader.4	139.783	0.154	0.204	0.406	2AR0_A	N/A
8	rpsblast.1	1e-36	0.125	0.156	0.278	2AR0_A	N/A
9	ffas.5	-0.609E+02	0.164	0.193	0.307	2F8L_A	N/A
10	pgenthreader.7	87.592	0.133	0.170	0.320	2F8L_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.