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© Arne Elofsson

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23413 : Target 4

Your submitted sequence: sequence (133 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.2
42.4640.0890.2070.678 2XB3_AN/A
2
pgenthreader.1
44.6010.0900.1870.576 3HLZ_AN/A
3
ffas.2
-0.706E+010.1200.1860.449 3LYD_AN/A
4
ffas.4
-0.695E+010.1080.1830.482 3HLZ_AN/A
5
pgenthreader.6
36.1030.0750.1830.614 1JHS_A3.40.1000.10.2.1
6
pgenthreader.5
36.3620.0760.1800.596 1V2B_A3.40.1000.10.1.1
7
pgenthreader.4
36.4770.0860.1750.531 2LNJ_AN/A
8
ffas.1
-0.729E+010.1170.1710.385 1TU1_AN/A
9
pgenthreader.3
40.4630.0840.1590.461 1TU1_AN/A
10
pgenthreader.10
32.7360.0710.1550.491 1VR8_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center