Pcons.net Protein Structure Prediction

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Friday, April 26 2024

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Submission

23412 : VIRT-43716:5'3' FRAME 3, START_POS=118

Your submitted sequence: sequence (750 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader
Queued locally: blast lomets itasser hhpred2

PCONS (only used 17 models from 2 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.9	31.243	0.007	0.119	0.569	1MV3_A	N/A
2	pgenthreader.8	31.243	0.002	0.099	0.489	1MV3_A	N/A
3	pgenthreader.3	41.327	0.010	0.068	0.302	1IZL_B	N/A
4	pgenthreader.5	41.327	0.010	0.068	0.302	1IZL_B	N/A
5	pgenthreader.1	53.853	0.011	0.068	0.297	2INY_A	N/A
6	pgenthreader.10	30.235	0.003	0.064	0.310	3IYL_Y	N/A
7	pgenthreader.4	41.327	0.011	0.059	0.250	1IZL_B	N/A
8	pgenthreader.2	41.327	0.011	0.059	0.250	1IZL_B	N/A
9	pgenthreader.7	37.568	0.010	0.056	0.239	1S58_A	2.170.30.10.3.1
10	pgenthreader.6	37.568	0.009	0.056	0.242	1S58_A	2.170.30.10.3.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.