Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23411 :

Your submitted sequence: sequence (353 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.14	-0.997E+02	0.379	0.413	0.549	1MQ4_A	1.10.510.10.18.1 3.30.200.20.21.1
2	rpsblast.7	3e-82	0.427	0.447	0.528	1PHK_A	N/A
3	ffas.6	-0.102E+03	0.371	0.403	0.533	2BMC_A	3.30.200.20.21.1 1.10.510.10.18.1
4	ffas.7	-0.101E+03	0.387	0.418	0.542	2C6E_A	3.30.200.20.21.1 1.10.510.10.18.1
5	ffas.4	-0.102E+03	0.388	0.421	0.551	2DWB_A	N/A
6	rpsblast.1	1e-83	0.336	0.375	0.529	2H6D_A	N/A
7	pgenthreader.2	191.619	0.355	0.395	0.557	2HAK_A	N/A
8	pgenthreader.6	188.652	0.442	0.468	0.571	2R0I_A	N/A
9	pgenthreader.3	191.223	0.504	0.515	0.559	2VGO_A	N/A
10	ffas.11	-0.100E+03	0.390	0.424	0.559	2VRX_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.