Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23410 : TcACAD

Your submitted sequence: sequence (401 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.11	-0.127E+03	0.594	0.611	0.681	1BUC_A	1.10.540.10.8.1 2.40.110.10.1.5 1.20.140.10.1.5
2	pgenthreader.6	15.070	0.713	0.713	0.711	1EGD_A	1.10.540.10.6.1 2.40.110.10.1.4 1.20.140.10.1.4
3	pgenthreader.7	15.070	0.001	0.007	0.029	1EGD_A	1.10.540.10.6.1 2.40.110.10.1.4 1.20.140.10.1.4
4	ffas.12	-0.126E+03	0.594	0.612	0.682	1IVH_A	1.10.540.10.1.2 2.40.110.10.1.6 1.20.140.10.7.1
5	rpsblast.8	1e-142	0.656	0.662	0.687	1IVH_D	1.10.540.10.1.2 2.40.110.10.1.6 1.20.140.10.7.1
6	ffas.7	-0.128E+03	0.614	0.632	0.702	1JQI_A	1.10.540.10.4.1 2.40.110.10.1.3 1.20.140.10.1.2
7	ffas.14	-0.121E+03	0.505	0.523	0.593	1R2J_A	1.10.540.10.7.1 2.40.110.10.4.1 1.20.140.10.4.1
8	ffas.9	-0.128E+03	0.554	0.584	0.704	1RX0_A	1.10.540.10.2.1 2.40.110.10.1.2 1.20.140.10.2.1
9	ffas.4	-0.130E+03	0.610	0.633	0.727	1UDY_A	1.10.540.10.6.1 2.40.110.10.1.4 1.20.140.10.1.4
10	ffas.1	-0.132E+03	0.610	0.626	0.691	1UKW_A	1.10.540.10.6.2 2.40.110.10.1.7 1.20.140.10.1.3

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.