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© Arne Elofsson

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23408 : SEQUENCE

Your submitted sequence: sequence (707 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast

rpsblast
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1N/A 1e-37N/AN/AN/AN/A3rce_AN/AN/A
1 1e-370.1060.1090.122 2YH5_AN/A
2N/A 2e-35N/AN/AN/AN/A3aag_AN/AN/A
2 2e-350.0690.0610.030 2D3O_1N/A
3N/A 1e-21N/AN/AN/AN/A2lgz_AN/AN/A
3 1e-210.0970.0860.040 1KGD_A3.40.50.300.87.1 3.30.63.10.1.1
4N/A 3e-20N/AN/AN/AN/A3wov_AN/AN/A
4 3e-200.0770.0660.020 1P9Y_AN/A
5 2e-180.0220.010-0.038 1V0O_B3.30.200.20.17.1 1.10.510.10.2.2
5N/A 2e-18N/AN/AN/AN/A3vu1_AN/AN/A
6 7e-160.0910.0820.045 3U4T_AN/A
6N/A 7e-16N/AN/AN/AN/A2zai_BN/AN/A
7 7e-080.0750.0730.066 1T11_A3.30.70.1050.1.1 1.10.3120.10.1.1 3.10.50.40.6.1
7N/A 7e-08N/AN/AN/AN/A2pff_BN/AN/A
8 9e-080.1000.1050.125 4F3V_AN/A
8N/A 9e-08N/AN/AN/AN/A3waj_AN/AN/A
9 1e-040.1040.1000.085 2IFU_AN/A
9N/A 1e-04N/AN/AN/AN/A2pff_BN/AN/A
10N/A 0.003N/AN/AN/AN/A3vgp_AN/AN/A
 
References
Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]
 
 
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