Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23407 : id:23406:1-166

Your submitted sequence: sequence (166 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.8	26.055	0.050	0.103	0.317	1JV1_A	3.90.550.10.21.1
2	ffas.3	-0.663E+01	0.030	0.063	0.196	1RPM_A	3.90.190.10.3.3
3	rpsblast.5	1.3	0.021	0.017	-0.000	1SBQ_B	3.40.50.10420.2.1
4	rpsblast.3	1.1	0.020	0.011	-0.026	1SOU_A	3.40.50.10420.1.2
5	rpsblast.6	1.8	0.022	0.021	0.017	1YDM_B	3.40.50.10420.3.1
6	ffas.10	-0.611E+01	0.032	0.063	0.188	2C7S_A	N/A
7	ffas.4	-0.660E+01	0.029	0.052	0.145	2CFV_A	N/A
8	ffas.1	-0.767E+01	0.041	0.063	0.150	2D00_A	N/A
9	rpsblast.7	1.9	0.024	0.019	-0.003	2JCB_A	N/A
10	ffas.5	-0.641E+01	0.032	0.059	0.169	2NV5_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.