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© Arne Elofsson

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23406 :

Your submitted sequence: sequence (510 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.7
42.8630.0230.1080.446 1GM5_AN/A
2
pgenthreader.2
45.2400.0210.1020.427 4LC9_AN/A
3
pgenthreader.6
43.3560.0170.0820.341 4CCA_AN/A
4
pgenthreader.1
45.6760.0200.0820.329 2EBF_XN/A
5
pgenthreader.3
44.9700.0150.0790.334 4JEH_AN/A
6
pgenthreader.8
42.8530.0200.0770.307 3I6E_AN/A
7
ffas.1
-0.148E+020.0190.0760.302 1CVR_A3.40.50.10390.1.1 3.40.50.1460.5.1 2.60.40.10.114.1
8
pgenthreader.10
42.8300.0210.0720.274 1QPZ_A1.10.260.40.7.1 3.40.50.2300.19.1 3.40.50.2300.23.1
9
pgenthreader.9
42.8460.0210.0700.266 2G8L_AN/A
10
pgenthreader.4
26.9060.0200.0690.263 1JV1_A3.90.550.10.21.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center