Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, May 1 2024

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Submission

23404 : id:23403:1-198

Your submitted sequence: sequence (198 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.17	-0.158E+02	0.005	0.008	0.018	1EKZ_A	3.30.160.20.5.1
2	ffas.7	-0.629E+02	0.326	0.311	0.250	1JFZ_A	1.10.1520.10.1.1
3	ffas.2	-0.828E+02	0.347	0.337	0.297	1O0W_A	1.10.1520.10.2.1 3.30.160.20.2.1
4	pgenthreader.4	54.062	0.260	0.269	0.304	1O0W_A	1.10.1520.10.2.1 3.30.160.20.2.1
5	ffas.14	-0.162E+02	0.009	0.011	0.017	1QU6_A	3.30.160.20.7.1 3.30.160.20.6.1
6	ffas.10	-0.262E+02	0.238	0.203	0.064	1U61_A	N/A
7	rpsblast.4	5e-09	0.125	0.100	0.000	1U61_A	N/A
8	ffas.19	-0.156E+02	0.002	0.007	0.029	1UHZ_A	N/A
9	rpsblast.6	2e-07	0.144	0.104	-0.055	1VW4_5	N/A
10	ffas.16	-0.161E+02	0.003	0.007	0.021	1X49_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.