Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23404 : id:23403:1-198

Your submitted sequence: sequence (198 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.828E+02	0.347	0.337	0.297	1O0W_A	1.10.1520.10.2.1 3.30.160.20.2.1
2	ffas.1	-0.830E+02	0.349	0.322	0.212	3N3W_A	N/A
3	ffas.3	-0.778E+02	0.348	0.319	0.201	2A11_A	N/A
4	ffas.6	-0.670E+02	0.339	0.314	0.212	2EB1_A	N/A
5	ffas.7	-0.629E+02	0.326	0.311	0.250	1JFZ_A	1.10.1520.10.1.1
6	ffas.5	-0.716E+02	0.319	0.302	0.235	3C4B_A	N/A
7	ffas.4	-0.752E+02	0.318	0.298	0.220	1YYK_A	1.10.1520.10.1.1 3.30.160.20.2.2
8	ffas.8	-0.600E+02	0.309	0.285	0.187	3RV0_A	N/A
9	pgenthreader.4	54.062	0.260	0.269	0.304	1O0W_A	1.10.1520.10.2.1 3.30.160.20.2.1
10	pgenthreader.5	48.471	0.261	0.265	0.280	2NUG_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.