Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

Main Menu

Submission

23402 : id:23401:1-340

Your submitted sequence: sequence (340 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 36 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.248E+02	0.030	0.054	0.151	1D5A_A	N/A
2	pgenthreader.2	34.274	0.028	0.036	0.067	1HR6_B	3.30.830.10.3.2 3.30.830.10.8.1
3	ffas.9	-0.238E+02	0.029	0.056	0.166	1QHT_A	N/A
4	ffas.8	-0.239E+02	0.031	0.063	0.190	1QQC_A	N/A
5	rpsblast.4	0.22	0.008	0.004	-0.012	1QZV_U	N/A
6	ffas.15	-0.227E+02	0.029	0.015	-0.042	1S5J_A	N/A
7	ffas.11	-0.238E+02	0.030	0.062	0.192	1TGO_A	N/A
8	pgenthreader.9	31.042	0.029	0.022	-0.008	1UQW_A	N/A
9	ffas.12	-0.237E+02	0.031	0.056	0.156	1WN7_A	N/A
10	ffas.1	-0.577E+02	0.046	0.096	0.296	1XHX_A	3.30.420.10.11.1 3.90.1600.10.1.1 3.30.1770.10.1.1 1.10.287.690.1.1 4.10.80.20.1.1 4.10.80.30.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.