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© Arne Elofsson

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23402 : id:23401:1-340

Your submitted sequence: sequence (340 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 36 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.1
53.2050.1270.1690.336 2PY5_AN/A
2
ffas.1
-0.577E+020.0460.0960.296 1XHX_A3.30.420.10.11.1 3.90.1600.10.1.1 3.30.1770.10.1.1 1.10.287.690.1.1 4.10.80.20.1.1 4.10.80.30.1.1
3
ffas.4
-0.243E+020.0350.0730.225 3IAY_AN/A
4
ffas.3
-0.245E+020.0370.0720.214 3CFO_AN/A
5
ffas.5
-0.242E+020.0340.0700.214 4DTNN/A
6
pgenthreader.4
31.8310.0270.0690.235 2IUT_AN/A
7
pgenthreader.10
30.9970.0310.0670.209 2YU1_AN/A
8
ffas.8
-0.239E+020.0310.0630.190 1QQC_AN/A
9
ffas.11
-0.238E+020.0300.0620.192 1TGO_AN/A
10
ffas.7
-0.239E+020.0310.0610.182 3A2F_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center