Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23395 : lpa3

Your submitted sequence: sequence (353 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	61.975	0.206	0.254	0.448	4AMJ_A	N/A
2	ffas.9	-0.787E+02	0.149	0.248	0.644	2KS9_A	N/A
3	pgenthreader.10	52.201	0.205	0.245	0.406	3RZE_A	N/A
4	pgenthreader.2	65.306	0.177	0.240	0.493	1U19_A	1.20.1070.10.6.1
5	ffas.5	-0.876E+02	0.140	0.237	0.627	1GZM_A	1.20.1070.10.6.1
6	ffas.15	-0.693E+02	0.140	0.237	0.625	2Z73_A	N/A
7	ffas.7	-0.850E+02	0.138	0.236	0.626	3V2W_A	N/A
8	ffas.16	-0.692E+02	0.147	0.234	0.584	3EML_A	N/A
9	ffas.1	-0.924E+02	0.146	0.233	0.579	3PWH_A	N/A
10	pgenthreader.4	60.550	0.165	0.229	0.485	3V2Y_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.