Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23393 : D3Y601

Your submitted sequence: sequence (708 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.17	-0.869E+02	0.089	0.112	0.205	1A4H_A	N/A
2	ffas.8	-0.107E+03	0.185	0.207	0.296	1USU_A	N/A
3	pgenthreader.6	217.558	0.188	0.220	0.349	1Y4U_A	N/A
4	ffas.10	-0.104E+03	0.180	0.204	0.300	1Y6Z_A	N/A
5	rpsblast.5	4e-73	0.156	0.180	0.278	1Y6Z_B	N/A
6	ffas.15	-0.871E+02	0.088	0.112	0.209	1ZW9_A	3.30.565.10.3.1
7	ffas.1	-0.209E+03	0.265	0.307	0.477	2CG9_A	N/A
8	pgenthreader.2	282.027	0.234	0.281	0.471	2CG9_A	N/A
9	pgenthreader.7	216.852	0.149	0.204	0.425	2CGE_A	N/A
10	ffas.9	-0.104E+03	0.202	0.223	0.306	2GQ0_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.