Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23393 : D3Y601

Your submitted sequence: sequence (708 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.176E+03	0.268	0.326	0.560	2O1U_A	N/A
2	ffas.1	-0.209E+03	0.265	0.307	0.477	2CG9_A	N/A
3	ffas.5	-0.138E+03	0.246	0.286	0.446	3HJC_A	N/A
4	ffas.4	-0.138E+03	0.251	0.286	0.425	3Q6M_A	N/A
5	pgenthreader.2	282.027	0.234	0.281	0.471	2CG9_A	N/A
6	pgenthreader.1	289.026	0.231	0.281	0.480	2O1U_A	N/A
7	ffas.3	-0.165E+03	0.207	0.278	0.562	2IOP_A	N/A
8	ffas.6	-0.124E+03	0.223	0.272	0.466	2O1T_A	N/A
9	pgenthreader.3	257.951	0.205	0.260	0.478	2IOQ_A	N/A
10	pgenthreader.9	215.186	0.210	0.253	0.426	2O1W_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.