Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23391 : 7C

Your submitted sequence: sequence (306 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.13	-0.290E+02	0.042	0.058	0.121	1AUT_L	2.10.25.10.23.1 2.10.25.10.2.2
2	ffas.15	-0.283E+02	0.064	0.083	0.158	1DAN_L	N/A
3	ffas.12	-0.291E+02	0.065	0.091	0.196	1DX5_I	2.10.25.10.10.1 2.10.25.10.26.1 2.10.25.10.19.1
4	rpsblast.10	2e-11	0.051	0.074	0.164	1DX5_J	2.10.25.10.10.1 2.10.25.10.26.1 2.10.25.10.19.1
5	ffas.20	-0.243E+02	0.049	0.063	0.120	1EMN_A	N/A
6	pgenthreader.6	52.038	0.052	0.077	0.176	1EMN_A	N/A
7	rpsblast.1	4e-20	0.041	0.066	0.168	1EXT_A	2.10.50.10.8.1 2.10.50.10.4.1
8	ffas.16	-0.283E+02	0.026	0.033	0.061	1FAX_L	2.10.25.10.2.1
9	rpsblast.2	5e-17	0.046	0.058	0.108	1G1S_A	3.10.100.10.9.1 2.10.25.10.6.2
10	ffas.6	-0.364E+02	0.048	0.053	0.074	1GL4_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.