Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23388 :

Your submitted sequence: sequence (135 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.616E+01	0.042	0.078	0.220	1G43_A	2.60.40.710.2.2
2	rpsblast.7	3.5	0.003	0.014	0.059	1MU2_A	3.10.10.10.1.1 3.30.70.270.2.2 3.30.70.270.3.2 3.30.70.270.4.2 3.30.420.10.14.1
3	ffas.8	-0.621E+01	0.035	0.042	0.068	1NE3_A	2.40.50.140.73.1
4	ffas.9	-0.619E+01	0.039	0.041	0.048	1NY4_A	2.40.50.140.73.1
5	pgenthreader.4	29.407	0.035	0.103	0.374	1YBI_A	2.80.10.50.2.1 2.80.10.50.4.1
6	ffas.6	-0.636E+01	0.060	0.082	0.170	2IWT_B	2.80.10.50.26.1
7	pgenthreader.1	30.847	0.039	0.077	0.227	2J5U_A	N/A
8	ffas.1	-0.106E+02	0.052	0.077	0.176	2KQ8_A	N/A
9	rpsblast.1	2e-05	0.048	0.035	-0.018	2KQ8_A	N/A
10	ffas.4	-0.837E+01	0.070	0.087	0.153	2KRS_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.