Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23387 : id:23386:1-105,235-268

Your submitted sequence: sequence (139 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 38 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.10	5.8	0.000	-0.005	-0.023	1AD3_A	3.40.605.10.8.1 3.40.309.10.6.1
2	ffas.10	-0.988E+01	0.047	0.051	0.066	1BUO_A	3.30.710.10.6.1
3	pgenthreader.2	23.530	0.068	0.102	0.238	1GUQ_A	3.30.428.10.4.1 3.30.428.10.1.1
4	pgenthreader.3	23.374	0.064	0.102	0.253	1JAK_A	3.20.20.80.31.1 3.30.379.10.3.1
5	ffas.9	-0.989E+01	0.049	0.049	0.048	1R28_A	3.30.710.10.2.1
6	rpsblast.6	2.8	0.028	0.020	-0.012	1VSR_A	3.40.960.10.1.1
7	ffas.17	-0.932E+01	0.046	0.064	0.134	2IHC_A	N/A
8	pgenthreader.9	22.438	0.009	0.024	0.086	2K7M_A	N/A
9	pgenthreader.5	23.172	0.052	0.074	0.161	2KGL_A	N/A
10	pgenthreader.10	22.431	0.047	0.073	0.179	2LZ0_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.